ncRNA ID | novel_csa_miR137 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr7:116406-116500 [-] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 21 |
Mature sequence(if miRNA) | 75 - UGAAGCUGCCAGCAUGAUCUA - 95 |
Stem-loop(if miRNA) |
--   A    - -            U   U    AAU  AG       G   UGA GCUG C CAGCAUGAUCUA CUU GGUU   AG  GAAUGUG A   ||| |||| | |||||||||||| ||| ||||   ||  |||||||   ACU CGAC G GUCGUACUGGAU GAA CCAA   UC  UUUAUAC A UC   C    A U            C   C    -AU  GU       A |
Stem-loop sequence | UGAAGCUGCCAGCAUGAUCUAUCUUUGGUUAAUAGAGGAAUGUGGAAACAUAUUUUGCUUAAACCCAAGCUAGGUCAUGCUGUGACAGCCUCACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010499056.1 |
|
3.0 | PREDICTED: Camelina sativa mediator of RNA polymerase II transcription subunit 33B (LOC104784486), partial mRNA | NA | coding protein | psRNATarget |