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BaseInfo

ncRNA ID novel_csa_miR137
Species Camelina sativa
Class miRNA
Genome position Chr7:116406-116500 [-]
Reference genome Cs
Source SRR1736515
Length 21
Mature sequence(if miRNA) 75 - UGAAGCUGCCAGCAUGAUCUA - 95
Stem-loop(if miRNA) --   A    - -            U   U    AAU  AG       G
  UGA GCUG C CAGCAUGAUCUA CUU GGUU   AG  GAAUGUG A
  ||| |||| | |||||||||||| ||| ||||   ||  |||||||
  ACU CGAC G GUCGUACUGGAU GAA CCAA   UC  UUUAUAC A
UC   C    A U            C   C    -AU  GU       A
Stem-loop sequence UGAAGCUGCCAGCAUGAUCUAUCUUUGGUUAAUAGAGGAAUGUGGAAACAUAUUUUGCUUAAACCCAAGCUAGGUCAUGCUGUGACAGCCUCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010499056.1
ncRNA:21   AUCUAGUACGACCGUCGAAGU   1
  *=*=|||*|||||||||||||
targets:427   CGUGUCAAGCUGGCAGCUUCA   447

3.0 PREDICTED: Camelina sativa mediator of RNA polymerase II transcription subunit 33B (LOC104784486), partial mRNA NA coding protein psRNATarget