ncRNA ID | novel_csa_miR126 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr6:1324104-1324319 [-] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 21 |
Mature sequence(if miRNA) | 196 - CAGGUGAUACACUGAUUCAGG - 216 |
Stem-loop(if miRNA) |
--        A  -          U  A   AG             C   UAA         G        -     C  C           GG    A  C  U UUU   CAGGUGAU CA CUGAUUCAGG UU CAU  GCAGUGUGGAAGA ACU   GGACCUAAA AAACAAAG UGAAA AG UCAUUGUGCGG  UAUC CA UC G   A   |||||||| || |||||||||| || |||  ||||||||||||| |||   ||||||||| |||||||| ||||| || |||||||||||  |||| || || |   GUCCAUUA GU GGCUAGGUCC AA GUA  CGUCACAUCUUCU UGA   CCUGGAUUU UUUGUUUC AUUUU UC AGUAACACGCC  AUAG GU AG C   A UG        A  A          U  C   AG             U   UUC         G        U     C  U           UA    C  A  U UGU |
Stem-loop sequence | CAGGUGAUACACUGAUUCAGGUUUACAUAGGCAGUGUGGAAGACACUUAAGGACCUAAAGAAACAAAGUGAAACAGCUCAUUGUGCGGGGUAUCACACUCUGUUUAAUGUCUGAAUGCGAUAAUCCGCACAAUGAUCUCUUUUAUCUUUGUUUGUUUAGGUCCCUUAGUUUCUUCUACACUGCGAAUGCAAUCCUGGAUCGGAUGAAUUACCUGGU |