ncRNA ID | novel_csa_miR125 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr6:3760008-3760201 [-] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 22 |
Mature sequence(if miRNA) | 173 - UGGCGAAAAGAGUCAUGUUUGG - 194 |
Stem-loop(if miRNA) |
--   CG       U      -U            U    U      -U   UUUC    C  U       UUUUAGAUU    C        -         AUU   UGG  AAAAGAG CAUGUU  GGUAGCCAAGGA GACU GCCUGA  CUU    ACCU CA GAUUCAA         CAUG GUUUUCGA UUAUUAUGC   U   |||  ||||||| ||||||  |||||||||||| |||| ||||||  |||    |||| || |||||||         |||| |||||||| |||||||||   U   ACC  UUUUUUC GUACAG  CUAUCGGUUUCU CUGA CGGACU  GGA    UGGG GU CUAAGUU         GUAC UAAAAGCU GAUAAUAUG   A GU   UA       -      UU            -    -      UU   ---U    C  U       ---------    -        U         AAA |
Stem-loop sequence | UGGCGAAAAGAGUCAUGUUUGGUAGCCAAGGAUGACUUGCCUGAUCUUUUUCACCUCCAUGAUUCAAUUUUAGAUUCAUGCGUUUUCGAUUAUUAUGCAUUUUAAAAGUAUAAUAGUUCGAAAAUCAUGUUGAAUCUUGCGGGUUAGGUUUCAGGCAGUCUCUUUGGCUAUCUUGACAUGCUUUUUUAUCCAUG |