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BaseInfo

ncRNA ID novel_csa_miR125
Species Camelina sativa
Class miRNA
Genome position Chr6:3760008-3760201 [-]
Reference genome Cs
Source SRR1736515
Length 22
Mature sequence(if miRNA) 173 - UGGCGAAAAGAGUCAUGUUUGG - 194
Stem-loop(if miRNA) --   CG       U      -U            U    U      -U   UUUC    C  U       UUUUAGAUU    C        -         AUU
  UGG  AAAAGAG CAUGUU  GGUAGCCAAGGA GACU GCCUGA  CUU    ACCU CA GAUUCAA         CAUG GUUUUCGA UUAUUAUGC   U
  |||  ||||||| ||||||  |||||||||||| |||| ||||||  |||    |||| || |||||||         |||| |||||||| |||||||||   U
  ACC  UUUUUUC GUACAG  CUAUCGGUUUCU CUGA CGGACU  GGA    UGGG GU CUAAGUU         GUAC UAAAAGCU GAUAAUAUG   A
GU   UA       -      UU            -    -      UU   ---U    C  U       ---------    -        U         AAA
Stem-loop sequence UGGCGAAAAGAGUCAUGUUUGGUAGCCAAGGAUGACUUGCCUGAUCUUUUUCACCUCCAUGAUUCAAUUUUAGAUUCAUGCGUUUUCGAUUAUUAUGCAUUUUAAAAGUAUAAUAGUUCGAAAAUCAUGUUGAAUCUUGCGGGUUAGGUUUCAGGCAGUCUCUUUGGCUAUCUUGACAUGCUUUUUUAUCCAUG