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BaseInfo

ncRNA ID	novel_csa_miR123
Species	Camelina sativa
Class	miRNA
Genome position	Chr6:3777130-3777278 [-]
Reference genome	Cs
Source	SRR1736515
Length	20
Mature sequence(if miRNA)	1 - AGGCGGUCUCCUUGGCUAUC - 20
Stem-loop(if miRNA)	--          U    U      -U   UUUC   UC   A      UUUUCAGUU     G   UG     U     AUU   UAGCCAAGGA GACU GCCUGA  CUU    ACC  CAA AUUCAG         CAUGG UUU  GAUUA UAUGC   U   |||||||||| |||| ||||||  |||    |||  ||| ||||||         ||||| |||  ||||| |||||   A   AUCGGUUCCU CUGG CGGACU  GGA    UGG  GUU UAAGUU         GUACU AAA  UUAAU AUAUG   A CU          -    -      UU   ---U   GA   C      ---------     -   GU     C     GAA
Stem-loop sequence	UAGCCAAGGAUGACUUGCCUGAUCUUUUUCACCUCCAAAAUUCAGUUUUCAGUUCAUGGGUUUUGGAUUAUUAUGCAUUUAAAAGGUAUACUAAUUUGAAAUCAUGUUGAAUCUUGAGGGUUAGGUUUCAGGCGGUCUCCUUGGCUAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019230836.1	ncRNA:20   CUAUCGGUUCCUCUGGCGGA   1   *||=|||||||||||*|||| targets:1282   AAUGGCCAAGGAGACGGCCU   1301 Target Full Sequence	2.5	PREDICTED: Camelina sativa uncharacterized LOC104716428 (LOC104716428), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019230835.1	ncRNA:20   CUAUCGGUUCCUCUGGCGGA   1   *||=|||||||||||*|||| targets:1402   AAUGGCCAAGGAGACGGCCU   1421 Target Full Sequence	2.5	PREDICTED: Camelina sativa uncharacterized LOC104716428 (LOC104716428), transcript variant X1, mRNA	NA	coding protein	psRNATarget