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BaseInfo

ncRNA ID novel_csa_miR122
Species Camelina sativa
Class miRNA
Genome position Chr6:3778982-3779154 [-]
Reference genome Cs
Source SRR1736515
Length 22
Mature sequence(if miRNA) 1 - UUAUAUGUUCUUCUGUCUCAUC - 22
Stem-loop(if miRNA) --   -         U     UU  -          U    U     -UU    ----    UA          GUCA       CAA     U
  UGA AUAGAAGAA CAUAU  GG UAGCCAAGGA GACU GCCUG   UCUU    UGAG  AAAUGGUUAU    UAUUUGA   GUGAC A
  ||| ||||||||| |||||  || |||||||||| |||| |||||   ||||    ||||  ||||||||||    |||||||   ||||| U
  ACU UGUCUUCUU GUAUA  CC AUCGGUUCCU CUGA CGGAC   AGAA    ACUC  UUUACCAAUA    AUGAACU   UAUUG A
CU   C         -     UU  U          -    -     UAU    AACU    GC          ----       --A     A
Stem-loop sequence UGAAUAGAAGAAUCAUAUUUGGUAGCCAAGGAUGACUUGCCUGUUUCUUUGAGUAAAAUGGUUAUGUCAUAUUUGACAAGUGACUAUAAGUUAUAUCAAGUAAUAACCAUUUCGCUCAUCAAAAGAUAUCAGGCAGUCUCCUUGGCUAUCCUUAUAUGUUCUUCUGUCUCAUC