| ncRNA ID | novel_csa_miR100 |
| Species | Camelina sativa |
| Class | miRNA |
| Genome position | Chr4:15908642-15908813 [+] |
| Reference genome | Cs |
| Source | SRR1736515 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAAUGAGGACAUGUGUCAGAUAUA - 24 |
| Stem-loop(if miRNA) |
--AAAU U C U G A G A GU UAUACC GAGGACA GUGU AGAUA AUAA A GCCAGGUGUCAU UUUUUUAG AGAA UGAGAAAAACCUUCUCAUAU U ||||||| |||| ||||| |||| | |||||||||||| |||||||| |||| |||||||||||||||||||| G CUUCUGU CACA UCUAU UAUU U CGGUUCACAGUA GAAGAAUC UUUU ACUCUUUUUGGAAGAGUAUA U UGUUUU C A C G A - G UG CUCUUC |
| Stem-loop sequence | AAAUGAGGACAUGUGUCAGAUAUAUAAGAAGCCAGGUGUCAUGUUUUUUAGAAGAAGUUGAGAAAAACCUUCUCAUAUUAUACCUGUCUUCUCAUAUGAGAAGGUUUUUCUCAGUUUUUGCUAAGAAGAUGACACUUGGCAUGUUAUCUAUCUAACACCUGUCUUCUUUUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_010445416.2 |
|
2.0 | PREDICTED: Camelina sativa transcription factor BOA-like (LOC104726544), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| GAFB01045418.1 |
|
2.5 | TSA: Camelina sativa Locus_19363_Transcript_1/1_Confidence_1.000_Length_244 mRNA sequence | NA | coding protein | psRNATarget |