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BaseInfo

ncRNA ID novel_csa_miR86
Species Camelina sativa
Class miRNA
Genome position Chr11:41832544-41832714 [-]
Reference genome Cs
Source SRR1736515
Length 18
Mature sequence(if miRNA) 154 - CGGGGCGAAGCCAGAGGA - 171
Stem-loop(if miRNA) --         GCC       --------AGCCAUAUUUUG  GCUCUACUGGGAUCAAUUAGAAAAUGAAUUCAUUGUUCUCAAUUUUC
  CGGGGCGAA   AGAGGAA                    AA                                               A
  |||||||||   |||||||                    ||                                               G
  GUUUUGUUU   UCUUUUU                    CC                                               U
AG         --A       AUUUUUAUUUUUAUUAUCUA  UUCAUACCUUGGUUCGAUGUGACCUUAGUAAUGAACGUAAUGUAACA
Stem-loop sequence CGGGGCGAAGCCAGAGGAAAGCCAUAUUUUGAAGCUCUACUGGGAUCAAUUAGAAAAUGAAUUCAUUGUUCUCAAUUUUCAGUACAAUGUAAUGCAAGUAAUGAUUCCAGUGUAGCUUGGUUCCAUACUUCCAUCUAUUAUUUUUAUUUUUAUUUUUCUAUUUGUUUUGGA