ncRNA ID | novel_csa_miR86 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr11:41832544-41832714 [-] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 18 |
Mature sequence(if miRNA) | 154 - CGGGGCGAAGCCAGAGGA - 171 |
Stem-loop(if miRNA) |
--         GCC       --------AGCCAUAUUUUG  GCUCUACUGGGAUCAAUUAGAAAAUGAAUUCAUUGUUCUCAAUUUUC   CGGGGCGAA   AGAGGAA                    AA                                               A   |||||||||   |||||||                    ||                                               G   GUUUUGUUU   UCUUUUU                    CC                                               U AG         --A       AUUUUUAUUUUUAUUAUCUA  UUCAUACCUUGGUUCGAUGUGACCUUAGUAAUGAACGUAAUGUAACA |
Stem-loop sequence | CGGGGCGAAGCCAGAGGAAAGCCAUAUUUUGAAGCUCUACUGGGAUCAAUUAGAAAAUGAAUUCAUUGUUCUCAAUUUUCAGUACAAUGUAAUGCAAGUAAUGAUUCCAGUGUAGCUUGGUUCCAUACUUCCAUCUAUUAUUUUUAUUUUUAUUUUUCUAUUUGUUUUGGA |