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BaseInfo

ncRNA ID	novel_csa_miR85
Species	Camelina sativa
Class	miRNA
Genome position	Chr2:14619867-14619940 [+]
Reference genome	Cs
Source	SRR1736515
Length	21
Mature sequence(if miRNA)	54 - AGUCUGGACACCUGAGGCAGC - 74
Stem-loop(if miRNA)	--               A       ---A UAAAAAUG   UGCCUCAGGUGUCCA ACUUUAA    G        C   ||||||||||||||| |||||||    |        A   ACGGAGUCCACAGGU UGAAAUU    G        A CG               C       AUGA AAUGCCUA
Stem-loop sequence	UGCCUCAGGUGUCCAAACUUUAAAGUAAAAAUGCAAAUCCGUAAGAGUAUUAAAGUCUGGACACCUGAGGCAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010443619.2	ncRNA:21   CGACGGAGUCCACAGGUCUGA   1   |||||||||||||||||*||| targets:292   GCUGCCUCAGGUGUCCAAACU   312 Target Full Sequence	1.5	PREDICTED: Camelina sativa uncharacterized LOC104724970 (LOC104724970), transcript variant X10, mRNA	NA	coding protein	psRNATarget
XM_010443611.2	ncRNA:21   CGACGGAGUCCACAGGUCUGA   1   |||||||||||||||||*||| targets:292   GCUGCCUCAGGUGUCCAAACU   312 Target Full Sequence	1.5	PREDICTED: Camelina sativa uncharacterized LOC104724970 (LOC104724970), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_010443606.2	ncRNA:21   CGACGGAGUCCACAGGUCUGA   1   |||||||||||||||||*||| targets:292   GCUGCCUCAGGUGUCCAAACU   312 Target Full Sequence	1.5	PREDICTED: Camelina sativa uncharacterized LOC104724970 (LOC104724970), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_010443564.2	ncRNA:21   CGACGGAGUCCACAGGUCUGA   1   |||||||||||||||||*||| targets:200   GCUGCCUCAGGUGUCCAAACU   220 Target Full Sequence	1.5	PREDICTED: Camelina sativa uncharacterized LOC104724970 (LOC104724970), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010443579.2	ncRNA:21   CGACGGAGUCCACAGGUCUGA   1   |||||||||||||||||*||| targets:292   GCUGCCUCAGGUGUCCAAACU   312 Target Full Sequence	1.5	PREDICTED: Camelina sativa uncharacterized LOC104724970 (LOC104724970), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010443570.2	ncRNA:21   CGACGGAGUCCACAGGUCUGA   1   |||||||||||||||||*||| targets:292   GCUGCCUCAGGUGUCCAAACU   312 Target Full Sequence	1.5	PREDICTED: Camelina sativa uncharacterized LOC104724970 (LOC104724970), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010443599.2	ncRNA:21   CGACGGAGUCCACAGGUCUGA   1   |||||||||||||||||*||| targets:292   GCUGCCUCAGGUGUCCAAACU   312 Target Full Sequence	1.5	PREDICTED: Camelina sativa uncharacterized LOC104724970 (LOC104724970), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_010443593.2	ncRNA:21   CGACGGAGUCCACAGGUCUGA   1   |||||||||||||||||*||| targets:292   GCUGCCUCAGGUGUCCAAACU   312 Target Full Sequence	1.5	PREDICTED: Camelina sativa uncharacterized LOC104724970 (LOC104724970), transcript variant X7, mRNA	NA	coding protein	psRNATarget