ncRNA ID | novel_csa_miR75 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr2:24169266-24169361 [+] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAGCUCAGGAGGGAUAGCGCC - 21 |
Stem-loop(if miRNA) |
--A         G           UGACU     --    U       UUG    AGCUCAGGA GGAUAGCGCCA     CAACA  ACAU UGUAUGU   C    ||||||||| |||||||||||     |||||  |||| |||||||    UUGAGUCCU CCUAUCGCGGU     GUUGU  UGUA AUAUACA   A ACC         A           ----U     UA    U       UAU |
Stem-loop sequence | AAGCUCAGGAGGGAUAGCGCCAUGACUCAACAACAUUUGUAUGUUUGCAUAUACAUAUAUAUGUAUUGUUGUUGGCGCUAUCCAUCCUGAGUUCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010517462.2 |
|
2.5 | PREDICTED: Camelina sativa serine/threonine-protein kinase KIPK1 (LOC104791546), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010517463.2 |
|
2.5 | PREDICTED: Camelina sativa serine/threonine-protein kinase KIPK1 (LOC104791546), transcript variant X2, mRNA | NA | coding protein | psRNATarget |