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BaseInfo

ncRNA ID novel_csa_miR74
Species Camelina sativa
Class miRNA
Genome position Chr2:16770728-16770803 [+]
Reference genome Cs
Source SRR1736515
Length 24
Mature sequence(if miRNA) 1 - UUUGCUCCAACCCACUUCUAUUCU - 24
Stem-loop(if miRNA) --       C         C         C   UAAGU
  UUUGCUC AACCCACUU UAUUCUCAC UCU     A
  ||||||| ||||||||| ||||||||| |||
  AAAUGAG UUGGGUGGA AUAAGAGUG AGA     G
CA       A         A         A   UAAGA
Stem-loop sequence UUUGCUCCAACCCACUUCUAUUCUCACCUCUUAAGUAGAGAAUAGAAGUGAGAAUAAAGGUGGGUUAGAGUAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010463388.2
ncRNA:24   UCUUAUCUUCACCCAACCUCGUUU   1
  |*|||=||=*||||||||||||||
targets:1792   AAAAUGGAGAUGGGUUGGAGCAAA   1815

3.0 PREDICTED: Camelina sativa uncharacterized LOC104742386 (LOC104742386), mRNA NA coding protein psRNATarget