ncRNA ID | novel_csa_miR63 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr19:13157275-13157356 [+] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUCGCUUGCAGAGAGAAAUCAC - 22 |
Stem-loop(if miRNA) |
---UUC G A UGU UCAAAAA U GCUUGCA AGAGAA UCACAG GG GCU U ||||||| |||||| |||||| || ||| U CGAACGU UCUCUU AGUGUC CC UGA U AGAAAU G - --U -UUUCUC A |
Stem-loop sequence | UUCGCUUGCAGAGAGAAAUCACAGUGUGGUCAAAAAGCUUUUUAAGUCUCUUUCCUCUGUGAUUCUCUGUGCAAGCUAAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GABO01017268.1 |
|
2.5 | TSA: Camelina sativa Unigene17852_WT mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAFB01048670.1 |
|
2.5 | TSA: Camelina sativa Locus_22653_Transcript_3/3_Confidence_0.625_Length_467 mRNA sequence | NA | coding protein | psRNATarget |