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BaseInfo

ncRNA ID	novel_csa_miR56
Species	Camelina sativa
Class	miRNA
Genome position	Chr19:484591-484653 [+]
Reference genome	Cs
Source	SRR1736515
Length	21
Mature sequence(if miRNA)	1 - UGAGACUAGUAUAGUGUUUGC - 21
Stem-loop(if miRNA)	--       A             -  G G  A   UGAGACU GUAUAGUGUUUGC CU U CU U   ||||||| ||||||||||||| || | || C   ACUCUGA CAUAUCACAGACG GA A GA G CA       C             A  G -  A
Stem-loop sequence	UGAGACUAGUAUAGUGUUUGCCUGUGCUAUCGAAGAGAGAGCAGACACUAUACCAGUCUCAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019235148.1	ncRNA:21   CGUUUGUGAUAUGAUCAGAGU   1   |=||||||||||||||||||= targets:2372   GUAAACACUAUACUAGUCUCG   2392 Target Full Sequence	1.0	PREDICTED: Camelina sativa telomerase reverse transcriptase-like (LOC104735722), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010455561.2	ncRNA:21   CGUUUGUGAUAUGAUCAGAGU   1   |=||||||||||||||||||= targets:2073   GUAAACACUAUACUAGUCUCG   2093 Target Full Sequence	1.0	PREDICTED: Camelina sativa telomerase reverse transcriptase-like (LOC104735722), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010455560.2	ncRNA:21   CGUUUGUGAUAUGAUCAGAGU   1   |=||||||||||||||||||= targets:2372   GUAAACACUAUACUAGUCUCG   2392 Target Full Sequence	1.0	PREDICTED: Camelina sativa telomerase reverse transcriptase-like (LOC104735722), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010422087.2	ncRNA:21   CGUUUGUGAUAUGAUCAGAGU   1   |=||||||||||||*|||||| targets:2346   GUAAACACUAUACUUGUCUCA   2366 Target Full Sequence	1.5	PREDICTED: Camelina sativa telomerase reverse transcriptase-like (LOC104705979), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010422089.2	ncRNA:21   CGUUUGUGAUAUGAUCAGAGU   1   |=||||||||||||*|||||| targets:2346   GUAAACACUAUACUUGUCUCA   2366 Target Full Sequence	1.5	PREDICTED: Camelina sativa telomerase reverse transcriptase-like (LOC104705979), transcript variant X2, mRNA	NA	coding protein	psRNATarget