ncRNA ID | novel_csa_miR44 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr1:2859970-2860091 [+] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UGUUCGUGUAUGUCAUUGGAUCU - 23 |
Stem-loop(if miRNA) |
--         AU                        CAACUGAUCCU      U    CUUU  U   UGUUCGUGU  GUCAUUGGAUCUUACUCCAAUAAC           ACUCCA UAAC    GU U   |||||||||  ||||||||||||||||||||||||           |||||| ||||    || U   ACAAGCACA  UAGUAACCUAGAAUGAGGUUAUUG           UGAGGU AUUG    CA C CA         --                        ---------UU      U    UUGU  A |
Stem-loop sequence | UGUUCGUGUAUGUCAUUGGAUCUUACUCCAAUAACCAACUGAUCCUACUCCAUUAACCUUUGUUUUCAACUGUUGUUAUUGGAGUUUGUUAUUGGAGUAAGAUCCAAUGAUACACGAACAAC |