Search result

BaseInfo

ncRNA ID novel_csa_miR44
Species Camelina sativa
Class miRNA
Genome position Chr1:2859970-2860091 [+]
Reference genome Cs
Source SRR1736515
Length 23
Mature sequence(if miRNA) 1 - UGUUCGUGUAUGUCAUUGGAUCU - 23
Stem-loop(if miRNA) --         AU                        CAACUGAUCCU      U    CUUU  U
  UGUUCGUGU  GUCAUUGGAUCUUACUCCAAUAAC           ACUCCA UAAC    GU U
  |||||||||  ||||||||||||||||||||||||           |||||| ||||    || U
  ACAAGCACA  UAGUAACCUAGAAUGAGGUUAUUG           UGAGGU AUUG    CA C
CA         --                        ---------UU      U    UUGU  A
Stem-loop sequence UGUUCGUGUAUGUCAUUGGAUCUUACUCCAAUAACCAACUGAUCCUACUCCAUUAACCUUUGUUUUCAACUGUUGUUAUUGGAGUUUGUUAUUGGAGUAAGAUCCAAUGAUACACGAACAAC