ncRNA ID | novel_csa_miR42 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr15:27715893-27716015 [+] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 22 |
Mature sequence(if miRNA) | 102 - UAUGAAGAGCGAGCACAAGAAU - 123 |
Stem-loop(if miRNA) |
--    C    A  G         U    G U       ACUAAA  GAAAUAAGAACGUGA   UCUU UGCU GC CUUCAUGUG AUAA U UAAGAUG      UA               A   |||| |||| || ||||||||| |||| | |||||||      ||               C   AGAA ACGA CG GAAGUAUAC UAUU A AUUCUAC      UG               U UA    C    G  A         C    G U       --CCAA  CUGAAUGCUCACUAU |
Stem-loop sequence | UCUUCUGCUAGCGCUUCAUGUGUAUAAGUUUAAGAUGACUAAAUAGAAAUAAGAACGUGAACUUAUCACUCGUAAGUCGUAACCCAUCUUAUAGUUAUCCAUAUGAAGAGCGAGCACAAGAAU |