Search result

BaseInfo

ncRNA ID novel_csa_miR42
Species Camelina sativa
Class miRNA
Genome position Chr15:27715893-27716015 [+]
Reference genome Cs
Source SRR1736515
Length 22
Mature sequence(if miRNA) 102 - UAUGAAGAGCGAGCACAAGAAU - 123
Stem-loop(if miRNA) --    C    A  G         U    G U       ACUAAA  GAAAUAAGAACGUGA
  UCUU UGCU GC CUUCAUGUG AUAA U UAAGAUG      UA               A
  |||| |||| || ||||||||| |||| | |||||||      ||               C
  AGAA ACGA CG GAAGUAUAC UAUU A AUUCUAC      UG               U
UA    C    G  A         C    G U       --CCAA  CUGAAUGCUCACUAU
Stem-loop sequence UCUUCUGCUAGCGCUUCAUGUGUAUAAGUUUAAGAUGACUAAAUAGAAAUAAGAACGUGAACUUAUCACUCGUAAGUCGUAACCCAUCUUAUAGUUAUCCAUAUGAAGAGCGAGCACAAGAAU