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BaseInfo

ncRNA ID novel_csa_miR41
Species Camelina sativa
Class miRNA
Genome position Chr14:5728352-5728459 [-]
Reference genome Cs
Source SRR1736515
Length 21
Mature sequence(if miRNA) 1 - UUUGCCUCCUCCGCCCAUACC - 21
Stem-loop(if miRNA) --     U  A  U        ----C    CC    C    G    ACCAU   U
  UAUGG CG AG AGGCAAAA     CUCA  UUUC AGCA AUCA     GAA U
  ||||| || || ||||||||     ||||  |||| |||| ||||     |||
  AUACC GC UC UCCGUUUU     GAGU  AGAG UCGU UAGU     UUU U
CC     C  C  C        AGAAU    UU    U    A    CAAGU   U
Stem-loop sequence UAUGGUCGAAGUAGGCAAAACCUCACCUUUCCAGCAGAUCAACCAUGAAUUUUUUUUGAACUGAUAUGCUUGAGAUUUGAGUAAGAUUUUGCCUCCUCCGCCCAUACC