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BaseInfo

ncRNA ID	novel_csa_miR31
Species	Camelina sativa
Class	miRNA
Genome position	Chr14:30087068-30087147 [+]
Reference genome	Cs
Source	SRR1736515
Length	21
Mature sequence(if miRNA)	60 - GCAAGUUGACUUUGGCUCUGU - 80
Stem-loop(if miRNA)	--U         A           UUUUU    -ACA    UU    GAGCCAAGG UGACUUGCCGA     AUCA    AAUC  A    ||||||||| |||||||||||     ||||    ||||    CUCGGUUUC GUUGAACGGCU     UGGU    UUAG  A UGU         A           -----    GAUA    UC
Stem-loop sequence	UGAGCCAAGGAUGACUUGCCGAUUUUUAUCAACAAAUCUUAACUGAUUAUAGUGGUUCGGCAAGUUGACUUUGGCUCUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GABO01012130.1	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:44   AAAGAGGCAAAUUCAACUUGC   64 Target Full Sequence	2.5	TSA: Camelina sativa Unigene12603_WT mRNA sequence	NA	coding protein	psRNATarget
XM_019228986.1	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:485   AAAGAGGCAAAUUCAACUUGC   505 Target Full Sequence	2.5	PREDICTED: Camelina sativa transcription factor MYB39-like (LOC104709146), mRNA	NA	coding protein	psRNATarget
XM_010494062.2	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:487   AAAGAGGCAAAUUCAACUUGC   507 Target Full Sequence	2.5	PREDICTED: Camelina sativa myb-related protein Hv1-like (LOC104769775), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010494061.2	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:492   AAAGAGGCAAAUUCAACUUGC   512 Target Full Sequence	2.5	PREDICTED: Camelina sativa myb-related protein Hv1-like (LOC104769775), transcript variant X1, mRNA	NA	coding protein	psRNATarget