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BaseInfo

ncRNA ID novel_csa_miR22
Species Camelina sativa
Class miRNA
Genome position Chr13:18035364-18035431 [-]
Reference genome Cs
Source SRR1736515
Length 19
Mature sequence(if miRNA) 1 - CCCCCUCUCUCUAGCGCCA - 19
Stem-loop(if miRNA) --     -U   U  A U     C GA   A   A
  GUGUU  GGA GA G GGGUU A  ACU GUA G
  |||||  ||| || | ||||| |  ||| |||
  CGCGA  UCU CU C CCUAA U  UGG UAU A
AC     UC   -  C C     A AG   A   G
Stem-loop sequence GUGUUUGGAUGAAGUGGGUUCAGAACUAGUAAGAGUAUAGGUGAUAAAUCCCCCUCUCUCUAGCGCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010443026.2
ncRNA:19   ACCGCGAUCUCUCUCCCCC   1
  *||*||||||||||||||*
targets:1056   AGGAGCUAGAGAGAGGGGC   1074

3.0 PREDICTED: Camelina sativa uncharacterized protein At5g41620-like (LOC104724530), mRNA NA coding protein psRNATarget