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BaseInfo

ncRNA ID	novel_csa_miR19
Species	Camelina sativa
Class	miRNA
Genome position	Chr12:29601646-29601731 [+]
Reference genome	Cs
Source	SRR1736515
Length	21
Mature sequence(if miRNA)	66 - UGGAUUGGAAGAGACGACACU - 86
Stem-loop(if miRNA)	--     C  A CU         --    A           GCC   UGUCG CU U  CAAUCCGUG  AUUG ACCAACAAUAU   U   ||||| || |  |||||||||  |||| |||||||||||   ACAGC GA A  GUUAGGUAC  UAGC UGGUUGUUGUG   A UC     A  G AG         CU    A           AUC
Stem-loop sequence	UGUCGCCUAUCUCAAUCCGUGAUUGAACCAACAAUAUGCCUACUAGUGUUGUUGGUACGAUUCCAUGGAUUGGAAGAGACGACACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010462255.2	ncRNA:21   UCACAGCAGAGAAGGUUAGGU   1   |**|||||||||||||||||= targets:215   ACGGUCGUCUCUUCCAAUCCG   235 Target Full Sequence	2.0	PREDICTED: Camelina sativa uncharacterized LOC104741394 (LOC104741394), mRNA	NA	coding protein	psRNATarget
XM_010445941.1	ncRNA:21   UCACAGCAGAGAAGGUUAGGU   1   |**|||||||||||||||||= targets:236   ACCGUCGUCUCUUCCAAUCCG   256 Target Full Sequence	2.0	PREDICTED: Camelina sativa uncharacterized LOC104726961 (LOC104726961), mRNA	NA	coding protein	psRNATarget
XM_010467739.2	ncRNA:21   UCACAGCAGAGAAGGUUAGGU   1   ***|||||||||||||||||* targets:55   UCCGUCGUCUCUUCCAAUCCC   75 Target Full Sequence	2.0	PREDICTED: Camelina sativa transcription initiation factor TFIID subunit 1b-like (LOC104746292), mRNA	NA	coding protein	psRNATarget
XM_010460410.2	ncRNA:21   UCACAGC-AGAGAAGGUUAGGU   1   =*|||=|-|||||||||||||| targets:266   GCUGUUGAUCUCUUCCAAUCCA   287 Target Full Sequence	3.0	PREDICTED: Camelina sativa pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like (LOC104739930), mRNA	NA	coding protein	psRNATarget
XM_010477930.2	ncRNA:21   UCACAGC-AGAGAAGGUUAGGU   1   =*|||=|-|||||||||||||| targets:284   GCUGUUGAUCUCUUCCAAUCCA   305 Target Full Sequence	3.0	PREDICTED: Camelina sativa pentatricopeptide repeat-containing protein At1g12620-like (LOC104755530), mRNA	NA	coding protein	psRNATarget