| ncRNA ID | novel_csa_miR16 |
| Species | Camelina sativa |
| Class | miRNA |
| Genome position | Chr9:1716772-1716987 [-] |
| Reference genome | Cs |
| Source | SRR1736515 |
| Length | 22 |
| Mature sequence(if miRNA) | 1 - UGUAUCGGAUGAGUCACCUGGU - 22 |
| Stem-loop(if miRNA) |
-- A - U U A C A C UAA - C C C GG A C U UUU CAGGUGAU CA CUGAU CAGG UU CAU C CAGUGUGGAAGA ACU GGACCUAAACAAACAAAG UGAAA AG UCA UGUGCGG UAUC CA UC G A |||||||| || ||||| |||| || ||| | |||||||||||| ||| |||||||||||||||||| ||||| || ||| ||||||| |||| || || | GUCCACUG GU GGCUA GUCC AA GUA G GUCACAUCUUCU UGA CCUGGAUUUGUUUGUUUC AUUUU UC AGU ACACGCC AUAG GU AG C A UG A A U U C A C U UUC U C U A UA C U U UGU |
| Stem-loop sequence | CAGGUGAUACACUGAUUCAGGUUUACAUCCACAGUGUGGAAGACACUUAAGGACCUAAACAAACAAAGUGAAACAGCUCACUGUGCGGGGUAUCACACUCUGUUUAAUGUCUGAUUGCGAUAAUCCGCACAAUGAUCUCUUUUAUCUUUGUUUGUUUAGGUCCCUUAGUUUCUUCUACACUGCGAAUGCAAUCCUGUAUCGGAUGAGUCACCUGGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GABO01001048.1 |
|
2.0 | TSA: Camelina sativa Unigene1063_WT mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_010508089.2 |
|
2.0 | PREDICTED: Camelina sativa lysine-specific demethylase JMJ25-like (LOC104783015), mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_019226851.1 |
|
2.0 | PREDICTED: Camelina sativa lysine-specific demethylase JMJ25-like (LOC104793410), mRNA | NA | coding protein | psRNATarget |