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BaseInfo

ncRNA ID novel_csa_miR14
Species Camelina sativa
Class miRNA
Genome position Chr9:16527509-16527698 [-]
Reference genome Cs
Source SRR1736515
Length 24
Mature sequence(if miRNA) 1 - GAGGACCAGGGUUCGAGAAACGCC - 24
Stem-loop(if miRNA) --    C                                       G                    C    AG   AAUUGG         G   U
  CGUU CUCGAACCCUGGUCCUCACCCUUUAACAACCUUCCCACA GACAAGUUGCCACCAAUUGA CUGC  AUC      UGGCAACUU UCC G
  |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  |||      ||||||||| |||
  GCAA GAGCUUGGGACCAGGAGUGGGAAAUUGUUGGAAGGGUGU CUGUUCAACGGUGGUUAACU GACG  UGG      AUUGUUGGA AGG U
CC    A                                       A                    A    AG   ---GAA         -   G
Stem-loop sequence CGUUCCUCGAACCCUGGUCCUCACCCUUUAACAACCUUCCCACAGGACAAGUUGCCACCAAUUGACCUGCAGAUCAAUUGGUGGCAACUUGUCCUGUGGGAAGGUUGUUAAAGGGUGAGCAGAUCAAUUGGUGGCAACUUGUCAUGUGGGAAGGUUGUUAAAGGGUGAGGACCAGGGUUCGAGAAACGCC