ncRNA ID | novel_csa_miR14 |
Species | Camelina sativa |
Class | miRNA |
Genome position | Chr9:16527509-16527698 [-] |
Reference genome | Cs |
Source | SRR1736515 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGGACCAGGGUUCGAGAAACGCC - 24 |
Stem-loop(if miRNA) |
--    C                                       G                    C    AG   AAUUGG         G   U   CGUU CUCGAACCCUGGUCCUCACCCUUUAACAACCUUCCCACA GACAAGUUGCCACCAAUUGA CUGC  AUC      UGGCAACUU UCC G   |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  |||      ||||||||| |||   GCAA GAGCUUGGGACCAGGAGUGGGAAAUUGUUGGAAGGGUGU CUGUUCAACGGUGGUUAACU GACG  UGG      AUUGUUGGA AGG U CC    A                                       A                    A    AG   ---GAA         -   G |
Stem-loop sequence | CGUUCCUCGAACCCUGGUCCUCACCCUUUAACAACCUUCCCACAGGACAAGUUGCCACCAAUUGACCUGCAGAUCAAUUGGUGGCAACUUGUCCUGUGGGAAGGUUGUUAAAGGGUGAGCAGAUCAAUUGGUGGCAACUUGUCAUGUGGGAAGGUUGUUAAAGGGUGAGGACCAGGGUUCGAGAAACGCC |