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BaseInfo

ncRNA ID novel_cmo_miR199
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr08:1839555-1839656 [+]
Reference genome Cmoschata_v1
Source SRR1632266
Length 21
Mature sequence(if miRNA) 1 - AAGGGUAGUGGAGUUACAUGG - 21
Stem-loop(if miRNA) --                     C    UUG   C   UCCCACUAAAAUC
  AAGGGUAGUGGAGUUACAUGG UAGU   UGA GAU             U
  ||||||||||||||||||||| ||||   ||| |||             C
  UUCCCAUCACCUCAAUGUACC AUCA   CAU UAG             G
CU                     A    -CA   G   UCCACUAAGUGCA
Stem-loop sequence AAGGGUAGUGGAGUUACAUGGCUAGUUUGUGACGAUUCCCACUAAAAUCUCGACGUGAAUCACCUGAUGUACACACUAACCAUGUAACUCCACUACCCUUUC