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BaseInfo

ncRNA ID novel_cmo_miR197
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr01:2015707-2015821 [+]
Reference genome Cmoschata_v1
Source SRR1632266
Length 24
Mature sequence(if miRNA) 92 - AUUUAAUGGUGGUGUGUAGGAAGA - 115
Stem-loop(if miRNA) --          A              ----GA A  AAC     A  -    AA   UU
  UUCCUACACG CACUAUUAAAUUUU      C GC   GAGAG GU AAAA  AGU  G
  |||||||||| ||||||||||||||      | ||   ||||| || ||||  |||  A
  AAGGAUGUGU GUGGUAAUUUAAAA      G UG   CUCUC CA UUUU  UCG  A
AG          G              AAAAAG C  AAC     -  C    AC   UU
Stem-loop sequence UUCCUACACGACACUAUUAAAUUUUGACAGCAACGAGAGAGUAAAAAAAGUUUGAAUUGCUCAUUUUCACCUCUCCAAGUCGGAAAAAAAAAUUUAAUGGUGGUGUGUAGGAAGA