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BaseInfo

ncRNA ID novel_cmo_miR190
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr00:23909633-23909762 [+]
Reference genome Cmoschata_v1
Source SRR1632266
Length 24
Mature sequence(if miRNA) 107 - UGAGUUUGGACAUUCGAAGUACGU - 130
Stem-loop(if miRNA) --U   GG      A       UG U A   -AUU    AA      -----    -A  GAG     A
   UGC  CGAAUG UUAGGCU  A G UUU    UUAG  UUUCGA     AGUA  CG   UGCAG A
   |||  |||||| |||||||  | | |||    ||||  ||||||     ||||  ||   |||||
   AUG  GCUUAC GGUUUGA  U C AAG    AAUC  AAAGCU     UCGU  GC   AUGUC A
UGC   AA      A       GU C A   GCUU    CC      AAAAU    GA  -AA     A
Stem-loop sequence UUGCGGCGAAUGAUUAGGCUUGAUGAUUUAUUUUAGAAUUUCGAAGUAACGGAGUGCAGAAAACUGUAAACGAGUGCUUAAAAUCGAAACCCUAAUUCGGAAACCUUGAGUUUGGACAUUCGAAGUACGU