ncRNA ID | novel_cmo_miR190 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr00:23909633-23909762 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632266 |
Length | 24 |
Mature sequence(if miRNA) | 107 - UGAGUUUGGACAUUCGAAGUACGU - 130 |
Stem-loop(if miRNA) |
--U   GG      A       UG U A   -AUU    AA      -----    -A  GAG     A    UGC  CGAAUG UUAGGCU  A G UUU    UUAG  UUUCGA     AGUA  CG   UGCAG A    |||  |||||| |||||||  | | |||    ||||  ||||||     ||||  ||   |||||    AUG  GCUUAC GGUUUGA  U C AAG    AAUC  AAAGCU     UCGU  GC   AUGUC A UGC   AA      A       GU C A   GCUU    CC      AAAAU    GA  -AA     A |
Stem-loop sequence | UUGCGGCGAAUGAUUAGGCUUGAUGAUUUAUUUUAGAAUUUCGAAGUAACGGAGUGCAGAAAACUGUAAACGAGUGCUUAAAAUCGAAACCCUAAUUCGGAAACCUUGAGUUUGGACAUUCGAAGUACGU |