ncRNA ID | novel_cmo_miR187 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr05:6383057-6383189 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632266 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAAUAUGAACCAAGAGACAUCAAU - 24 |
Stem-loop(if miRNA) |
--         C  A     A   A  AUACAAUAUG        AA AU     GAA      -G    A   UAAUAUGAA CA GAGAC UCA UC          CUUCAAUG  G  GUGAA   AAUAUU  UUGA A   ||||||||| || ||||| ||| ||          ||||||||  |  |||||   ||||||  |||| U   AUUGUACUU GU CUUUG AGU AG          GAAGUUAC  C  UACUU   UUAUAG  AACU U AU         U  A     A   A  --------AA        -A CG     AAC      AA    A |
Stem-loop sequence | UAAUAUGAACCAAGAGACAUCAAUCAUACAAUAUGCUUCAAUGAAGAUGUGAAGAAAAUAUUGUUGAAAUUAUCAAAAGAUAUUCAAUUCAUGCCACAUUGAAGAAGAAUGAAGUUUCAUGUUUCAUGUUAUA |