Search result

BaseInfo

ncRNA ID novel_cmo_miR187
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr05:6383057-6383189 [+]
Reference genome Cmoschata_v1
Source SRR1632266
Length 24
Mature sequence(if miRNA) 1 - UAAUAUGAACCAAGAGACAUCAAU - 24
Stem-loop(if miRNA) --         C  A     A   A  AUACAAUAUG        AA AU     GAA      -G    A
  UAAUAUGAA CA GAGAC UCA UC          CUUCAAUG  G  GUGAA   AAUAUU  UUGA A
  ||||||||| || ||||| ||| ||          ||||||||  |  |||||   ||||||  |||| U
  AUUGUACUU GU CUUUG AGU AG          GAAGUUAC  C  UACUU   UUAUAG  AACU U
AU         U  A     A   A  --------AA        -A CG     AAC      AA    A
Stem-loop sequence UAAUAUGAACCAAGAGACAUCAAUCAUACAAUAUGCUUCAAUGAAGAUGUGAAGAAAAUAUUGUUGAAAUUAUCAAAAGAUAUUCAAUUCAUGCCACAUUGAAGAAGAAUGAAGUUUCAUGUUUCAUGUUAUA