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BaseInfo

ncRNA ID novel_cmo_miR175
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr17:429888-430031 [-]
Reference genome Cmoschata_v1
Source SRR1632267
Length 22
Mature sequence(if miRNA) 1 - UUCUUGUUUUUGUUCGUUUGUU - 22
Stem-loop(if miRNA) ----CAA           ACA     UU     UU     U      C       UG  GGUUUC     GG    AU
       GAACAAGAGCA   AGGAU  GAGUC  GGAUU GAAGUU AAGAGAC  AA      GUCAG  GAGA  U
       |||||||||||   |||||  |||||  ||||| |||||| |||||||  ||      |||||  ||||
       CUUGUUUUUGU   UCUUG  CUUAG  UUUAG UUUUAG UUUUUUG  UU      UAGUC  UUUU  U
UUGUUUG           ---     UU     -U     C      U       GU  ------     UU    AG
Stem-loop sequence CAAGAACAAGAGCAACAAGGAUUUGAGUCUUGGAUUUGAAGUUCAAGAGACUGAAGGUUUCGUCAGGGGAGAAUUUGAUUUUUUCUGAUUUUGGUUUUUUUGAUUUUCGAUUUUGAUUCUUGUUCUUGUUUUUGUUCGUUUGUU