ncRNA ID | novel_cmo_miR173 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr17:8320069-8320226 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632267 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCAACUUGAGUAUAGUUCAAUUG - 24 |
Stem-loop(if miRNA) |
--A     U                     AA           GU   AG        AG                 UUA    UCAAC UGAGUAUAGUUCAAUUGGUUA  GAUGUUAGUAA  UAU  GAGAGGUC  AGGUUCGAAUCUCUAUU   U    ||||| |||||||||||||||||||||  |||||||||||  |||  ||||||||  |||||||||||||||||    AGUUG ACUCGUAUCGAGUUAAUUAAU  CUACAAUCAUU  AUA  UUUUCUAG  UCUAAGUUUAGAGAUAA   A UAC     U                     -A           UG   -A        CA                 CAA |
Stem-loop sequence | AUCAACUUGAGUAUAGUUCAAUUGGUUAAAGAUGUUAGUAAGUUAUAGGAGAGGUCAGAGGUUCGAAUCUCUAUUUUAUAAACAAUAGAGAUUUGAAUCUACGAUCUUUUAAUAGUUUACUAACAUCAUAAUUAAUUGAGCUAUGCUCAUGUUGACAU |