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BaseInfo

ncRNA ID novel_cmo_miR173
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr17:8320069-8320226 [+]
Reference genome Cmoschata_v1
Source SRR1632267
Length 24
Mature sequence(if miRNA) 1 - AUCAACUUGAGUAUAGUUCAAUUG - 24
Stem-loop(if miRNA) --A     U                     AA           GU   AG        AG                 UUA
   UCAAC UGAGUAUAGUUCAAUUGGUUA  GAUGUUAGUAA  UAU  GAGAGGUC  AGGUUCGAAUCUCUAUU   U
   ||||| |||||||||||||||||||||  |||||||||||  |||  ||||||||  |||||||||||||||||
   AGUUG ACUCGUAUCGAGUUAAUUAAU  CUACAAUCAUU  AUA  UUUUCUAG  UCUAAGUUUAGAGAUAA   A
UAC     U                     -A           UG   -A        CA                 CAA
Stem-loop sequence AUCAACUUGAGUAUAGUUCAAUUGGUUAAAGAUGUUAGUAAGUUAUAGGAGAGGUCAGAGGUUCGAAUCUCUAUUUUAUAAACAAUAGAGAUUUGAAUCUACGAUCUUUUAAUAGUUUACUAACAUCAUAAUUAAUUGAGCUAUGCUCAUGUUGACAU