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BaseInfo

ncRNA ID novel_cmo_miR172
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr17:4521087-4521233 [+]
Reference genome Cmoschata_v1
Source SRR1632267
Length 24
Mature sequence(if miRNA) 124 - AAUGAAGAUGUGGAGAAAAGGUUG - 147
Stem-loop(if miRNA) --                                                  U          -AA   U   G
  ACCUUUUCUUCACAUCUUCAUUGAAGCAUAUUGUAUGAUUGAUGUCUCUU GUUCAUAUCA   UCC CUU A
  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||| |||
  UGGAAAAGAGGUGUAGAAGUAACUUCGUAUAACAUACUAACUACAGAGAA CAAGUAUAGU   AGG GAA A
GU                                                  C          AAG   U   G
Stem-loop sequence ACCUUUUCUUCACAUCUUCAUUGAAGCAUAUUGUAUGAUUGAUGUCUCUUUGUUCAUAUCAAAUCCUCUUGAAGAAGUGGAGAAUGAUAUGAACCAAGAGACAUCAAUCAUACAAUAUGCUUCAAUGAAGAUGUGGAGAAAAGGUUG