ncRNA ID | novel_cmo_miR172 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr17:4521087-4521233 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632267 |
Length | 24 |
Mature sequence(if miRNA) | 124 - AAUGAAGAUGUGGAGAAAAGGUUG - 147 |
Stem-loop(if miRNA) |
--                                                  U          -AA   U   G   ACCUUUUCUUCACAUCUUCAUUGAAGCAUAUUGUAUGAUUGAUGUCUCUU GUUCAUAUCA   UCC CUU A   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||| |||   UGGAAAAGAGGUGUAGAAGUAACUUCGUAUAACAUACUAACUACAGAGAA CAAGUAUAGU   AGG GAA A GU                                                  C          AAG   U   G |
Stem-loop sequence | ACCUUUUCUUCACAUCUUCAUUGAAGCAUAUUGUAUGAUUGAUGUCUCUUUGUUCAUAUCAAAUCCUCUUGAAGAAGUGGAGAAUGAUAUGAACCAAGAGACAUCAAUCAUACAAUAUGCUUCAAUGAAGAUGUGGAGAAAAGGUUG |