ncRNA ID | novel_cmo_miR171 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr15:9751843-9752024 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632267 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCAAUCGAUGUGGGAUCUCACGAU - 24 |
Stem-loop(if miRNA) |
--                           U                   C CUC C      U --G   -----        AAUUGAUGU  G   CCAAUCGAUGUGGGAUCUCACGAUCUA CCCCCUUCGGGGUCCAGUG C   G UGGCAC C   CUC     CAUUCUCC         GG A   ||||||||||||||||||||||||||| ||||||||||||||||||| |   | |||||| |   |||     ||||||||         ||   GGUUGGUUACACCCUAGAGUGUUAGGU GGGGGAAGCCCCGGGUUGC G   C ACCGUG G   GAG     GUGGGAGG         CC C GG                           -                   A AAA A      U ACA   CACAA        AAGGAUAGU  C |
Stem-loop sequence | CCAAUCGAUGUGGGAUCUCACGAUCUAUCCCCCUUCGGGGUCCAGUGCCCUCGCUGGCACUCGCUCCAUUCUCCAAUUGAUGUGGGACCCCUGAUAGGAAGGAGGGUGAACACGAGACAGUGUGCCAACAAAGACGUUGGGCCCCGAAGGGGGUGGAUUGUGAGAUCCCACAUUGGUUGGGG |