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BaseInfo

ncRNA ID novel_cmo_miR158
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr11:2680264-2680408 [-]
Reference genome Cmoschata_v1
Source SRR1632267
Length 21
Mature sequence(if miRNA) 125 - UGCUUACAGUUGGUUAUGGAU - 145
Stem-loop(if miRNA) --           GG           UGA   UUUGCGGCUUUAGGGUUUUGAUUUCGUUAUUCGAUUUUGAA
  UGCUUACAGUU  UUAUGGAUUUG   GGA                                         A
  |||||||||||  |||||||||||   |||                                         U
  AUGAAUGUCAA  GAUAUUUAGAU   AUU                                         A
UG           --           UGG   UUUAUGAUACCUAAACGAGGAAUAACUAAGGAAAUUUACAC
Stem-loop sequence UGCUUACAGUUGGUUAUGGAUUUGUGAGGAUUUGCGGCUUUAGGGUUUUGAUUUCGUUAUUCGAUUUUGAAAUACACAUUUAAAGGAAUCAAUAAGGAGCAAAUCCAUAGUAUUUUUAGGUUAGAUUUAUAGAACUGUAAGUAGU