ncRNA ID | novel_cmo_miR157 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr11:6654893-6655006 [-] |
Reference genome | Cmoschata_v1 |
Source | SRR1632267 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAGGAAGGAUCGCACAUUGGAUA - 24 |
Stem-loop(if miRNA) |
--A    -GA            C    ---  --U      AUG      C  A   UGAA    CCAA   GUGAUCUUUCUU AGGA   GU   CUGUUA   GGGCGG UC UCG    A    ||||   |||||||||||| ||||   ||   ||||||   |||||| || |||    A    GGUU   CGCUAGGAAGGA UCCU   CG   GAUGAU   UCCGCC AG AGC    C AUA    ACA            -    AAC  UUU      --A      A  C   UUCC |
Stem-loop sequence | ACCAAGAGUGAUCUUUCUUCAGGAGUUCUGUUAAUGGGGCGGCUCAUCGUGAAAACCCUUCGACGAACCGCCUAUAGUAGUUUGCCAAUCCUAGGAAGGAUCGCACAUUGGAUA |