ncRNA ID | novel_cmo_miR154 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr11:10856914-10857018 [-] |
Reference genome | Cmoschata_v1 |
Source | SRR1632267;SRR1632266 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCGGACCAGGCUUCAUUCCCG - 21 |
Stem-loop(if miRNA) |
--      UU      CU       C     UC      -------G  A     GG   GGAAUG  GUUUGG  CGAGGUU AUGUA  AACAAC        GC CAUUU  A   ||||||  ||||||  ||||||| |||||  ||||||        || |||||   CCUUAC  CGGACC  GCUCUAA UAUAU  UUGUUG        UG GUAAA  U GC      UU      AG       -     UU      GUUUAUUA  -     GC |
Stem-loop sequence | GGAAUGUUGUUUGGCUCGAGGUUCAUGUAUCAACAACGGCACAUUUGGAUCGAAAUGGUAUUAUUUGGUUGUUUUUAUAUAAUCUCGGACCAGGCUUCAUUCCCG |