ncRNA ID | novel_cmo_miR153 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr11:13789475-13789678 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632267 |
Length | 24 |
Mature sequence(if miRNA) | 181 - AGCGGUGGAUCUGGGGCGUUACAA - 204 |
Stem-loop(if miRNA) |
--      A    AGC         GCA                           A      U        AA                   G        U   GUAACG CCCA   CCACCGUUA   GAUAUUGUCCUCUUUGGGCUUUUCCUU UGGGCU CCCCUCAA  CUUUAAAACGCGUCUGUUA GGGAAGGU U   |||||| ||||   |||||||||   ||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||| ||||||||   CAUUGC GGGU   GGUGGCGAU   CUAUAACAGGAGAAACUCGAAAGGGAA GCCCGA GGGGAGUU  GAAAUUUUGCGCAGACGAU CCCUUCCA C AA      G    CUA         AGA                           A      U        CC                   A        C |
Stem-loop sequence | GUAACGACCCAAGCCCACCGUUAGCAGAUAUUGUCCUCUUUGGGCUUUUCCUUAUGGGCUUCCCCUCAAAACUUUAAAACGCGUCUGUUAGGGGAAGGUUUCCACCUUCCCAUAGCAGACGCGUUUUAAAGCCUUGAGGGGUAGCCCGAAAGGGAAAGCUCAAAGAGGACAAUAUCAGAUAGCGGUGGAUCUGGGGCGUUACAA |