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BaseInfo

ncRNA ID novel_cmo_miR139
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr09:3713413-3713487 [+]
Reference genome Cmoschata_v1
Source SRR1632267
Length 24
Mature sequence(if miRNA) 1 - AUACGGAUGGAAACUGAGAAGUGG - 24
Stem-loop(if miRNA) --A      -U     CU     G      ----U    U
   UACGGA  GGAAA  GAGAA UGGUUU     UCGG A
   ||||||  |||||  ||||| ||||||     ||||
   GUGUUU  UCUUU  UUUUU AUUAGG     AGUU A
UUG      UU     UU     A      UAUAU    U
Stem-loop sequence AUACGGAUGGAAACUGAGAAGUGGUUUUUCGGUAAUUUGAUAUAUGGAUUAAUUUUUUUUUUCUUUUUUGUGGUU