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BaseInfo

ncRNA ID novel_cmo_miR115
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr05:2052029-2052110 [-]
Reference genome Cmoschata_v1
Source SRR1632267
Length 20
Mature sequence(if miRNA) 63 - UGACAGAAGAGAGGGAGCAC - 82
Stem-loop(if miRNA) --       -   G            U    ---------     G
  UGACAGA AGA AGGGAGCACACA AGUU         GUUUC A
  ||||||| ||| |||||||||||| ||||         |||||
  ACUGUCU UCU UCUCUCGUGUGU UCGA         CGGAG G
CC       C   A            C    AGUUCGUAU     A
Stem-loop sequence UGACAGAAGAGAGGGAGCACACAUAGUUGUUUCGAGAGAGGCUAUGCUUGAAGCUCUGUGUGCUCUCUAUCUCUCUGUCACC