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BaseInfo

ncRNA ID novel_cmo_miR114
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr05:3529895-3530100 [+]
Reference genome Cmoschata_v1
Source SRR1632267
Length 24
Mature sequence(if miRNA) 1 - UGUGAUUUAAUUGGUGGGACGGAA - 24
Stem-loop(if miRNA) --           UG      C    UUC  GUUUACAAUUGAAAAACUUAUGAAUCCCCUCUUUGGCCUGUCCGAUCGUUACCAAAAUUAAGGUUCUCGUCAU
  UGUGAUUUAAU  GUGGGA GGAA   UG                                                                         G
  |||||||||||  |||||| ||||   ||
  ACACUAAAUUG  CACCCU CCUU   AA                                                                         A
CA           CA      A    --A  CUUUUUGGAUGCUUAGGGGAGAAACCGGACAGGCCAGCAAUGGUUUUAAUUCCGAGUGGGAGUACUCGUCAUA
Stem-loop sequence UGUGAUUUAAUUGGUGGGACGGAAUUCUGGUUUACAAUUGAAAAACUUAUGAAUCCCCUCUUUGGCCUGUCCGAUCGUUACCAAAAUUAAGGUUCUCGUCAUGAAUACUGCUCAUGAGGGUGAGCCUUAAUUUUGGUAACGACCGGACAGGCCAAAGAGGGGAUUCGUAGGUUUUUCAAAUUCCAUCCCACACGUUAAAUCACAAC