ncRNA ID | novel_cmo_miR114 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr05:3529895-3530100 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632267 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUGAUUUAAUUGGUGGGACGGAA - 24 |
Stem-loop(if miRNA) |
--           UG      C    UUC  GUUUACAAUUGAAAAACUUAUGAAUCCCCUCUUUGGCCUGUCCGAUCGUUACCAAAAUUAAGGUUCUCGUCAU   UGUGAUUUAAU  GUGGGA GGAA   UG                                                                         G   |||||||||||  |||||| ||||   ||   ACACUAAAUUG  CACCCU CCUU   AA                                                                         A CA           CA      A    --A  CUUUUUGGAUGCUUAGGGGAGAAACCGGACAGGCCAGCAAUGGUUUUAAUUCCGAGUGGGAGUACUCGUCAUA |
Stem-loop sequence | UGUGAUUUAAUUGGUGGGACGGAAUUCUGGUUUACAAUUGAAAAACUUAUGAAUCCCCUCUUUGGCCUGUCCGAUCGUUACCAAAAUUAAGGUUCUCGUCAUGAAUACUGCUCAUGAGGGUGAGCCUUAAUUUUGGUAACGACCGGACAGGCCAAAGAGGGGAUUCGUAGGUUUUUCAAAUUCCAUCCCACACGUUAAAUCACAAC |