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BaseInfo

ncRNA ID ath-miRf10824-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CUCUACUCGACCUGGUUGUCGAGUG - NA
Stem-loop(if miRNA) U   G   U  --U          UG UU         UCU   G  
 GGU AUG GC   CUACUCGACC  G  GUCGAGUGG   CUU AGA
 ||| ||| ||   ||||||||||  |  |||||||||   ||| ||U
 CUA UAC UG   GGUGAGCUGG  C  CAGCUCAUC   GAA UUC
A   G   -  UUU          GU UC         CUC   G  
Stem-loop sequence UGGUGAUGUGCUCUACUCGACCUGGUUGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAUGAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:25   GUGAGCUGUUGGUCCAGCUCAUCUC   1
  |||||||||||||||||||||||||
targets:809   CACUCGACAACCAGGUCGAGUAGAG   833

0.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183194.1
ncRNA:25   GUGAGCUGUUGGUCCAGCUCAUCUC   1
  ||||||||*|||||||||||||||*
targets:450   CACUCGACCACCAGGUCGAGUAGAA   474

2.0 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:25   GUGAGCUGUUGGUCCAGCUCAUCUC   1
  ||||||||**||||||||||||||*
targets:1105   CACUCGACCCCCAGGUCGAGUAGAA   1129

3.0 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
DQ069808.1
ncRNA:25   GUGAGCUGUUGGUCCAGCUCAUCUC   1
  |||||*||*||*||||||||||||*
targets:45   CACUCAACCACAAGGUCGAGUAGAC   69

3.0 Arabidopsis thaliana At2g10880 mRNA, partial sequence NA coding protein psRNATarget