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BaseInfo

ncRNA ID novel_cmo_miR88
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr03:927627-927769 [-]
Reference genome Cmoschata_v1
Source SRR1632267;SRR1632266
Length 24
Mature sequence(if miRNA) 120 - AACGCGUCUGUUAGGAGAAGGUUU - 143
Stem-loop(if miRNA) --               -   A                            UA       -    UUG     U
  AACGCGUCUGUUAGG AGA GGUUUCCACACCCUUAUAAAGGGUGUUU  UUCUCCU CCCA   UGAUG C
  ||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||| ||||   ||||| C
  UUGCGCAGACGAUCC UCU CCAAAGGUGUGGGAAUAUUUCCCACAAA  AAGAGGA GGGU   ACUAC C
UU               C   -                            GC       A    -UG     A
Stem-loop sequence AACGCGUCUGUUAGGAGAAGGUUUCCACACCCUUAUAAAGGGUGUUUUAUUCUCCUCCCAUUGUGAUGUCCCACAUCAGUUGGGAAGGAGAACGAAACACCCUUUAUAAGGGUGUGGAAACCUCUCCCUAGCAGACGCGUUUU