ncRNA ID | novel_cmo_miR88 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr03:927627-927769 [-] |
Reference genome | Cmoschata_v1 |
Source | SRR1632267;SRR1632266 |
Length | 24 |
Mature sequence(if miRNA) | 120 - AACGCGUCUGUUAGGAGAAGGUUU - 143 |
Stem-loop(if miRNA) |
--               -   A                            UA       -    UUG     U   AACGCGUCUGUUAGG AGA GGUUUCCACACCCUUAUAAAGGGUGUUU  UUCUCCU CCCA   UGAUG C   ||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||| ||||   ||||| C   UUGCGCAGACGAUCC UCU CCAAAGGUGUGGGAAUAUUUCCCACAAA  AAGAGGA GGGU   ACUAC C UU               C   -                            GC       A    -UG     A |
Stem-loop sequence | AACGCGUCUGUUAGGAGAAGGUUUCCACACCCUUAUAAAGGGUGUUUUAUUCUCCUCCCAUUGUGAUGUCCCACAUCAGUUGGGAAGGAGAACGAAACACCCUUUAUAAGGGUGUGGAAACCUCUCCCUAGCAGACGCGUUUU |