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BaseInfo

ncRNA ID ath-miRf10821-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - GGUACUCGACCACGGGGUCGAGUG - NA
Stem-loop(if miRNA) U   - G         ACGG        GGUG     AA     G G   ----GU          
 GGU G UACUCGACC    GGUCGAGU    AUGUG  GUUAU G UUC      CUACUUGACCA
 ||| | |||||||||    ||||||||    |||||  ||||| | |||      ||||||||||G
 CUA U GUGAGCUGG    CCAGCUCA    UAUAC  UAGUG U AAG      GGUGAACUGGG
A   G G         GGGA        ----     CG     G G   AGUGGU          
Stem-loop sequence UGGUGGUACUCGACCACGGGGUCGAGUGGUGAUGUGAAGUUAUGGGUUCGUCUACUUGACCAGGGGUCAAGUGGUGGUGAGAAGUGGUGAUGCCAUAUACUCGACCAGGGGGUCGAGUGGUGAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY231407.1
ncRNA:24   GUGAGCUGGGGCACCAGCUCAUGG   1
  |||||||||||*||||||||||||
targets:536   CACUCGACCCCAUGGUCGAGUACC   559

1.5 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget
AY231407.1
ncRNA:24   GUGAGCUGGGGCACCAGCUCAUGG   1
  =||||*|||*||||||||||||||
targets:643   UACUCAACCACGUGGUCGAGUACC   666

2.0 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget
AY231407.1
ncRNA:24   GUGAGCUGGGGCACCAGCUCAUGG   1
  ||||||||||||||||||||||**
targets:490   CACUCGACCCCGUGGUCGAGUAGA   513

2.5 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget