Search result

BaseInfo

ncRNA ID novel_cmo_miR64
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr20:3088689-3088803 [+]
Reference genome Cmoschata_v1
Source SRR1632266
Length 21
Mature sequence(if miRNA) 95 - UUGAGCCGCGUCAAUAUCUCG - 115
Stem-loop(if miRNA) -A          U  U       -     G    GA     AGAAAAAGGAUG    UU   G
  AGGUAUUGAC CG CUCAAUU UGAAA ACAU  UUAAG            CAUU  UGA A
  |||||||||| || ||||||| ||||| ||||  |||||            ||||  |||
  UCUAUAACUG GC GAGUUAG AUUUU UGUG  GAUUU            GUAA  AUU A
GC          C  C       U     G    UC     -----------G    UU   A
Stem-loop sequence AAGGUAUUGACUCGUCUCAAUUUGAAAGACAUGAUUAAGAGAAAAAGGAUGCAUUUUUGAGAAAUUAUUAAUGGUUUAGCUGUGUGUUUUAUGAUUGAGCCGCGUCAAUAUCUCG