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BaseInfo

ncRNA ID novel_cmo_miR54
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr18:2044340-2044412 [+]
Reference genome Cmoschata_v1
Source SRR1632266;SRR1632267
Length 21
Mature sequence(if miRNA) 1 - UCAUUGAGUGCAGCGUUGAUG - 21
Stem-loop(if miRNA) --UC        C          UAAU    CCAAUU
    AUUGAGUG AGCGUUGAUG    GACA      A
    |||||||| ||||||||||    ||||      U
    UAACUUAC UCGCGACUAC    UUGU      A
GCAC        A          --CU    ACCUCA
Stem-loop sequence UCAUUGAGUGCAGCGUUGAUGUAAUGACACCAAUUAUAACUCCAUGUUUCCAUCAGCGCUACAUUCAAUCACG