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BaseInfo

ncRNA ID novel_cmo_miR52
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr18:8086853-8086958 [-]
Reference genome Cmoschata_v1
Source SRR1632266
Length 24
Mature sequence(if miRNA) 83 - AAGGGACAAUAACGGCAUUGAUAU - 106
Stem-loop(if miRNA) -A           CG         UCA     CC           ----U    C
  AGGGACAAUAA  GCAUUGAUA   UAUAA  UGGGUAGGGAA     ACAA U
  |||||||||||  |||||||||   |||||  |||||||||||     ||||
  UUCCUGUUGUU  UGUAACUAU   AUAUU  GUCCAUCCUUU     UGUU A
UA           AA         -UG     AU           UAAAC    G
Stem-loop sequence AAGGGACAAUAACGGCAUUGAUAUCAUAUAACCUGGGUAGGGAAUACAACUAGUUGUCAAAUUUUCCUACCUGUAUUAUAGUUAUCAAUGUAAUUGUUGUCCUUAU