ncRNA ID | novel_cmo_miR52 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr18:8086853-8086958 [-] |
Reference genome | Cmoschata_v1 |
Source | SRR1632266 |
Length | 24 |
Mature sequence(if miRNA) | 83 - AAGGGACAAUAACGGCAUUGAUAU - 106 |
Stem-loop(if miRNA) |
-A           CG         UCA     CC           ----U    C   AGGGACAAUAA  GCAUUGAUA   UAUAA  UGGGUAGGGAA     ACAA U   |||||||||||  |||||||||   |||||  |||||||||||     ||||   UUCCUGUUGUU  UGUAACUAU   AUAUU  GUCCAUCCUUU     UGUU A UA           AA         -UG     AU           UAAAC    G |
Stem-loop sequence | AAGGGACAAUAACGGCAUUGAUAUCAUAUAACCUGGGUAGGGAAUACAACUAGUUGUCAAAUUUUCCUACCUGUAUUAUAGUUAUCAAUGUAAUUGUUGUCCUUAU |