ncRNA ID | novel_cmo_miR47 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr18:12064567-12064664 [+] |
Reference genome | Cmoschata_v1 |
Source | SRR1632266 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCGAGGCCGAGCAUCCUUUC - 21 |
Stem-loop(if miRNA) |
--            CA     U  A    U  UU  --------    U CAA   UUCGAGGCCGAG  UCCUU CU GCAC CA  CC        UCUC C   U   ||||||||||||  ||||| || |||| ||  ||        |||| |   AAGUUCCGGUUC  AGGAA GA CGUG GU  GG        AGGG G   C GG            UC     C  C    U  UG  CCACAUCU    U UAG |
Stem-loop sequence | UUCGAGGCCGAGCAUCCUUUCUAGCACUCAUUCCUCUCUCCAAUCGAUGUGGGAUCUACACCGGGUUGUGUGCCAGCAAGGACUCUUGGCCUUGAAGG |