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BaseInfo

ncRNA ID novel_cmo_miR47
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr18:12064567-12064664 [+]
Reference genome Cmoschata_v1
Source SRR1632266
Length 21
Mature sequence(if miRNA) 1 - UUCGAGGCCGAGCAUCCUUUC - 21
Stem-loop(if miRNA) --            CA     U  A    U  UU  --------    U CAA
  UUCGAGGCCGAG  UCCUU CU GCAC CA  CC        UCUC C   U
  ||||||||||||  ||||| || |||| ||  ||        |||| |
  AAGUUCCGGUUC  AGGAA GA CGUG GU  GG        AGGG G   C
GG            UC     C  C    U  UG  CCACAUCU    U UAG
Stem-loop sequence UUCGAGGCCGAGCAUCCUUUCUAGCACUCAUUCCUCUCUCCAAUCGAUGUGGGAUCUACACCGGGUUGUGUGCCAGCAAGGACUCUUGGCCUUGAAGG