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BaseInfo

ncRNA ID novel_cmo_miR46
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr02:839847-839941 [+]
Reference genome Cmoschata_v1
Source SRR1632266
Length 22
Mature sequence(if miRNA) 74 - UUGAGCCGCGUCAAUAUCUCGU - 95
Stem-loop(if miRNA) --  A            U       U     -       UAAAUUUGU
  GA GGUAUUGAUGCG CUCAAUU GAAAG ACAUGGC         U
  || |||||||||||| ||||||| ||||| |||||||         A
  CU CUAUAACUGCGC GAGUUAG CUUUU UGUGCCG         U
UG  -            C       U     G       UUUCGUUAU
Stem-loop sequence GAAGGUAUUGAUGCGUCUCAAUUUGAAAGACAUGGCUAAAUUUGUUAUUAUUGCUUUGCCGUGUGUUUUCUGAUUGAGCCGCGUCAAUAUCUCGU