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BaseInfo

ncRNA ID novel_cmo_miR42
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr17:3744823-3744909 [-]
Reference genome Cmoschata_v1
Source SRR1632266
Length 21
Mature sequence(if miRNA) 67 - GGAAUGUUGUCUGGCUCGAGG - 87
Stem-loop(if miRNA) --      UU      CU   G      --UUUCGUUA   UUU
  GGAAUG  GUCUGG  CGA GACACU          GCG   G
  ||||||  ||||||  ||| ||||||          |||   A
  CCUUAC  CGGACC  GCU CUGUGA          UGU   U
CC      UU      AG   G      CUUAUAUAUG   UUU
Stem-loop sequence GGAAUGUUGUCUGGCUCGAGGACACUUUUCGUUAGCGUUUGAUUUUUGUGUAUAUAUUCAGUGUCGUCGGACCAGGCUUCAUUCCCC