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BaseInfo

ncRNA ID novel_cmo_miR41
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr17:7725138-7725277 [-]
Reference genome Cmoschata_v1
Source SRR1632266
Length 21
Mature sequence(if miRNA) 1 - UUAACCAUUUCAAAGUCACUC - 21
Stem-loop(if miRNA) --               C        --CU    ---    GUUCAAAAUCGCUAUGAAACAUGUCUUCAAU
  GUGAUUUUGAAAUGG UAAAAUCA    GUGG   UGGU                               C
  ||||||||||||||| ||||||||    ||||   ||||                               A
  CACUGAAACUUUACC AUUUUAGU    AUAG   AAGU                               U
CU               A        AAAA    UCU    UUUGUUAAUAUGAGCAUACUUUUAGUUAAUU
Stem-loop sequence GUGAUUUUGAAAUGGCUAAAAUCACUGUGGUGGUGUUCAAAAUCGCUAUGAAACAUGUCUUCAAUCAUUUAAUUGAUUUUCAUACGAGUAUAAUUGUUUUGAAUCUGAUAAAAAUGAUUUUAACCAUUUCAAAGUCACUC