ncRNA ID | novel_cmo_miR39 |
Species | Cucurbita moschata |
Class | miRNA |
Genome position | Cmo_Chr17:9546644-9546775 [-] |
Reference genome | Cmoschata_v1 |
Source | SRR1632266;SRR1632267 |
Length | 21 |
Mature sequence(if miRNA) | 112 - UGAAGCUGCCAGCAUGAUCUA - 132 |
Stem-loop(if miRNA) |
--   A    - -C           C   U   CG  ----U    U    GAAAAAGAGAAAAGUGAA   UGA GCUG C  AGCAUGAUCUA CUA GGU  GC     AGGU AAGU                  A   ||| |||| |  ||||||||||| ||| |||  ||     |||| ||||                  A   ACU CGAC G  UCGUACUGGAU GAU CCA  CG     UCCG UUUA                  G UC   C    A UC           U   C   AU  UUACU    -    GGUAAAGUUAGAGAAAUA |
Stem-loop sequence | UGAAGCUGCCAGCAUGAUCUACCUAUGGUCGGCUAGGUUAAGUGAAAAAGAGAAAAGUGAAAAGAUAAAGAGAUUGAAAUGGAUUUGCCUUCAUUGCUAACCCUAGUUAGGUCAUGCUCUGACAGCCUCACU |