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BaseInfo

ncRNA ID novel_cmo_miR39
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr17:9546644-9546775 [-]
Reference genome Cmoschata_v1
Source SRR1632266;SRR1632267
Length 21
Mature sequence(if miRNA) 112 - UGAAGCUGCCAGCAUGAUCUA - 132
Stem-loop(if miRNA) --   A    - -C           C   U   CG  ----U    U    GAAAAAGAGAAAAGUGAA
  UGA GCUG C  AGCAUGAUCUA CUA GGU  GC     AGGU AAGU                  A
  ||| |||| |  ||||||||||| ||| |||  ||     |||| ||||                  A
  ACU CGAC G  UCGUACUGGAU GAU CCA  CG     UCCG UUUA                  G
UC   C    A UC           U   C   AU  UUACU    -    GGUAAAGUUAGAGAAAUA
Stem-loop sequence UGAAGCUGCCAGCAUGAUCUACCUAUGGUCGGCUAGGUUAAGUGAAAAAGAGAAAAGUGAAAAGAUAAAGAGAUUGAAAUGGAUUUGCCUUCAUUGCUAACCCUAGUUAGGUCAUGCUCUGACAGCCUCACU