Search result

BaseInfo

ncRNA ID novel_cmo_miR35
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr01:1103637-1103746 [-]
Reference genome Cmoschata_v1
Source SRR1632266
Length 24
Mature sequence(if miRNA) 1 - ACAAUAUCGGCUAGUAGUGGGCUU - 24
Stem-loop(if miRNA) --             A        C      A   UUUC    AAGG         CG
  GCCCACUAUUAGU GAUAUUGU CUCUUU GAC    CCUU    UUUUUAACA  U
  ||||||||||||| |||||||| |||||| |||    ||||    |||||||||
  CGGGUGAUGAUCG CUAUAACA GAGAAA CUG    GGAG    AGGGAUUGU  G
UU             G        U      C   --UU    ----         UU
Stem-loop sequence GCCCACUAUUAGUAGAUAUUGUCCUCUUUAGACUUUCCCUUAAGGUUUUUAACACGUGUUUGUUAGGGAGAGGUUGUCCAAAGAGUACAAUAUCGGCUAGUAGUGGGCUU