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BaseInfo

ncRNA ID novel_cmo_miR33
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr16:3003047-3003164 [+]
Reference genome Cmoschata_v1
Source SRR1632266;SRR1632267
Length 22
Mature sequence(if miRNA) 1 - AUGGGAGGCGGUGAGAUUCAAU - 22
Stem-loop(if miRNA) --AU      CGG            A -  G   AC       UC  AA  U      CA
    GGGAGG   UGAGAUUCAAUU G CU CUG  UCAUUCA  CA  UA UGAGUU  A
    ||||||   |||||||||||| | || |||  |||||||  ||  || ||||||
    CCUUCC   AUUCUAAGUUAG C GA GAC  AGUAAGU  GU  AU ACUCGG  A
CUUU      -AA            A A  G   GC       GA  AA  U      UA
Stem-loop sequence AUGGGAGGCGGUGAGAUUCAAUUAGCUGCUGACUCAUUCAUCCAAAUAUUGAGUUCAAAAUGGCUCAUUAAAUGAGUGAAUGACGCAGGAGACAGAUUGAAUCUUAAACCUUCCUUUC