Search result

BaseInfo

ncRNA ID novel_cmo_miR29
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr16:1009615-1009714 [+]
Reference genome Cmoschata_v1
Source SRR1632266;SRR1632267
Length 24
Mature sequence(if miRNA) 77 - ACCUGUUGAGGAUUGUUGGGAGAG - 100
Stem-loop(if miRNA) --  G    A      G     -     ----C    -UG   UUU     UG
  UU CCAA AAUUCU AACAG UGAUG     UAUC   GUU   GAAGU  A
  || |||| |||||| ||||| |||||     ||||   |||   |||||  G
  GA GGUU UUAGGA UUGUC ACUAC     GUAG   CAG   UUUCG  G
GA  G    G      G     C     AAAUA    UUG   -UC     UU
Stem-loop sequence UUGCCAAAAAUUCUGAACAGUGAUGCUAUCUGGUUUUUGAAGUUGAGGUUGCUUUCUGACGUUGAUGAUAAACAUCACCUGUUGAGGAUUGUUGGGAGAG