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BaseInfo

ncRNA ID novel_cmo_miR28
Species Cucurbita moschata
Class miRNA
Genome position Cmo_Chr16:186373-186487 [+]
Reference genome Cmoschata_v1
Source SRR1632266
Length 22
Mature sequence(if miRNA) 94 - CGAUGCUCAUUUCGGCAAGAAA - 115
Stem-loop(if miRNA) --       C           C  -  CA         ----    AAAU     UUAAU
  UCUUGCU AAAUGAGUAUU CA AA  GAGCAGCAG    AUGA    GGGAA     U
  ||||||| ||||||||||| || ||  |||||||||    ||||    |||||
  AGAACGG UUUACUCGUAG GU UU  UUCGUCGUC    UACU    UUCUU     C
AA       C           C  C  CC         AUCG    AUAU     UCUUA
Stem-loop sequence UCUUGCUCAAAUGAGUAUUCCAAACAGAGCAGCAGAUGAAAAUGGGAAUUAAUUCAUUCUUUCUUUAUAUCAUGCUACUGCUGCUUCCUUCUGCGAUGCUCAUUUCGGCAAGAAA